Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789251.1_cds_XP_016495433.1_915
CDS Infomation

[gene=LOC107814513] [db_xref=GeneID:107814513] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016495433.1] [location=complement(join(10962..11582,11728..12651))] [gbkey=CDS]
Sequence

ATGCAACTGAGATTTGAAGAATACCAACTAACCAAAATGCAGTTCTTCAGCTTGGTTTCC
ATTTTCCTATTTCTATCTTTCCTCTTTTTGTTAAGGATATGGAAGAACTCCAATAGCCAA
AGCAAAAAGTTGCCACCAGGTCCATGGAAACTACCAATACTAGGAAGTATGCTTCATATG
GTTGGTGGACTACCACACCATGTCCTTAGAGATTTAGCCAAAAAATATGGACCACTTATG
CACCTTCAATTAGGTGAAGTTTCTGCGGTTGTGGTTACTTCTCCTGATACGGCAAAAGAA
GTATTAAAAACTCATGACATCGCTTTTGCGTCTAGGCCTAGCCTTTTGGCCCCGGAGATT
GTCTGTTACAATAGGTCTGATCTAGCCTTTTGCCCCTATGGCGACTATTGGAGACAAATG
CGTAAAATATGTGTCTTGGAAGTGCTCAGTGCCAAGAATGTTCGGACATTTAGCTCTATT
AGGCGGAATGAAGTTCTTCGTCTCATTAATTTTATCCGGTCATCTTCTGGTGAACCTATT
AATGTTACGGAAAGGATCTTTTTGTTCACAAGCTCCATGACATGTAGATCAGCGTTTGGG
CAAGTGTTCAAAGAGCAAGACAAATTTATACAACTAATTAAAGAAGTGATACTCTTAGCA
GGAGGGTTTGATGTGGCTGACATATTCCCTTCACTGAAGTTTCTTCATGTGCTCAGTGGA
ATGAAGGGTAAGATTATGAATGCACACCATAAGGTAGATGCCATTGTTGAGAATGTCATC
AATGAGCACAAGAAAAATCTTGCAATTGGGAAAACTAATGGAGCGTTAGGAGGTGAAGAT
TTAATTGATGTTCTTCTAAGACTTATGAATGATGGAGGCCTTCAATTTCCTATCACCAAC
GACAACATCAAAGCTATAATTTTTGACATGTTTGCTGCCGGGACAGAGACTTCATCGTCA
ACAATTGTGTGGGCTATGGTAGAAATGGTGAAAAATCCAGCCGTATTCGCGAAAGCTCAA
GCAGAAGTAAGAGAAGCATTTAGAGGAAAAGAAACTTTCGATGAAAATGATGTGGAGGAG
CTAAACTACCTAAAGTTAGTAATAAAAGAAACTCTAAGACTTCATCCACCGGTTCCACTT
TTGCTCCCAAGAGAATGTAGGGAAGAGACAAATATAAACGGCTACACTATTCCTGTAAAG
ACCAAAGTCATGGTTAATGTTTGGGCTTTGGGAAGAGATCCAAAATATTGGAATGACGCA
GAAACTTTTATGCCAGAGAGATTTGAGCAGTGCTCTAAGGATTTTGTTGGTAATAATTTT
GAATATCTTCCATTTGGTGGCGGAAGGAGGATTTGTCCTGGGATTTCGTTTGGCTTAGCT
AATGCTTATTTGCCATTGGCTCAATTACTATATCACTTCGATTGGAAACTCCCTGCTGGA
ATCGAACCAAGCGACTTGGACTTGACTGAGTTGGTTGGAGTAACTGCCGCTAGAAAAAGT
GACCTTTACTTGGTTGCGACTCCTTATCAACCTCCTCAAAAGTGA

Peptide Sequence

PEP ID

XP_016495433.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MQLRFEEYQLTKMQFFSLVSIFLFLSFLFLLRIWKNSNSQSKKLPPGPWKLPILGSMLHM
VGGLPHHVLRDLAKKYGPLMHLQLGEVSAVVVTSPDTAKEVLKTHDIAFASRPSLLAPEI
VCYNRSDLAFCPYGDYWRQMRKICVLEVLSAKNVRTFSSIRRNEVLRLINFIRSSSGEPI
NVTERIFLFTSSMTCRSAFGQVFKEQDKFIQLIKEVILLAGGFDVADIFPSLKFLHVLSG
MKGKIMNAHHKVDAIVENVINEHKKNLAIGKTNGALGGEDLIDVLLRLMNDGGLQFPITN
DNIKAIIFDMFAAGTETSSSTIVWAMVEMVKNPAVFAKAQAEVREAFRGKETFDENDVEE
LNYLKLVIKETLRLHPPVPLLLPRECREETNINGYTIPVKTKVMVNVWALGRDPKYWNDA
ETFMPERFEQCSKDFVGNNFEYLPFGGGRRICPGISFGLANAYLPLAQLLYHFDWKLPAG
IEPSDLDLTELVGVTAARKSDLYLVATPYQPPQK

Transcript Sequence

Gene sequence data has not been registered.